BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F02SP1|AL425400
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1953 0.0
>3x_Contig1776
Length = 26138
Score = 1953 bits (984), Expect = 0.0
Identities = 992/994 (99%), Gaps = 1/994 (0%)
Strand = Plus / Minus
Query: 1 cccatcttctggcgctgctgcttcgcrg-ttcaacccttcttcgaggaaatgctgcaata 59
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 18360 cccatcttctggcgctgctgcttcgcaggttcaacccttcttcgaggaaatgctgcaata 18301
Query: 60 atagatgtactgtttgttcatcccctttcgtaattgccaaatggatacacgtatccccgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18300 atagatgtactgtttgttcatcccctttcgtaattgccaaatggatacacgtatccccgt 18241
Query: 120 cgtaggtttttaacattgcagtggcatcatgaccaagttggatcaaatggcggcaaatca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18240 cgtaggtttttaacattgcagtggcatcatgaccaagttggatcaaatggcggcaaatca 18181
Query: 180 agtatctaccgtagaatgcagcgtaatgcaacgatgaccagccgttcgtactgtcgatgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18180 agtatctaccgtagaatgcagcgtaatgcaacgatgaccagccgttcgtactgtcgatgt 18121
Query: 240 tctcgagcaggtctggccatcgtttgagaattcttctcacaacgcccaatttaccctgga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18120 tctcgagcaggtctggccatcgtttgagaattcttctcacaacgcccaatttaccctgga 18061
Query: 300 caatcgcctctcttagtcttatccttggctcagggatcattggaacaaaattttataggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18060 caatcgcctctcttagtcttatccttggctcagggatcattggaacaaaattttataggt 18001
Query: 360 gcaaactgttctctctctttctttctcactctcttttctgtccatctattcttcactcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18000 gcaaactgttctctctctttctttctcactctcttttctgtccatctattcttcactcta 17941
Query: 420 gggtaaatacattgatttaagttattcctttattttaagattttattattgtacttttta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17940 gggtaaatacattgatttaagttattcctttattttaagattttattattgtacttttta 17881
Query: 480 tcgctcgatgtttattgttctcttttttttacttataattttgatatactactaatgaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17880 tcgctcgatgtttattgttctcttttttttacttataattttgatatactactaatgaca 17821
Query: 540 agtgaaaacgccagaagctgaaaaaccctgttaaactgctgtattgataatggaagaata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17820 agtgaaaacgccagaagctgaaaaaccctgttaaactgctgtattgataatggaagaata 17761
Query: 600 agtgatgagcaaaggagaatatcaagaaaagtactatattaactcattcaatggccgata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17760 agtgatgagcaaaggagaatatcaagaaaagtactatattaactcattcaatggccgata 17701
Query: 660 attctactaatcatcatccgaaagtgatattaccgagggaccaaactagcgttaatggtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17700 attctactaatcatcatccgaaagtgatattaccgagggaccaaactagcgttaatggtt 17641
Query: 720 ctgatgtgaacgatgccaattataacttaactgtagatcatgccttaaggtatcagaaac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17640 ctgatgtgaacgatgccaattataacttaactgtagatcatgccttaaggtatcagaaac 17581
Query: 780 tattggccaatagagcagggacgaacttggcaactggcccacttatgaccaaaaggttaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17580 tattggccaatagagcagggacgaacttggcaactggcccacttatgaccaaaaggttaa 17521
Query: 840 gagaacagaaagaggggcaagattctgctagcgctcaggcagctcaaagtatagattatc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17520 gagaacagaaagaggggcaagattctgctagcgctcaggcagctcaaagtatagattatc 17461
Query: 900 tttacataagagctaggttaccggatagaactgcgctggattatcaattgagtgttacta 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17460 tttacataagagctaggttaccggatagaactgcgctggattatcaattgagtgttacta 17401
Query: 960 gtacactccattcgttatatgagactataagggg 993
||||||||||||||||||||||||||||||||||
Sbjct: 17400 gtacactccattcgttatatgagactataagggg 17367
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6913
Number of Sequences: 1807
Number of extensions: 6913
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)